Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retreg3Q9CQV4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retreg3Q9CQV4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Retreg3Q9CQV4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retreg3Q9CQV4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retreg3Q9CQV4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retreg3Q9CQV4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retreg3Q9CQV4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retreg3Q9CQV4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm4806-201ENSMUST00000222704 1690 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 AC130831.1-201ENSMUST00000224546 1474 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm36997-201ENSMUST00000195090 707 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm44262-201ENSMUST00000204969 372 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 AC161426.1-201ENSMUST00000214137 286 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 AC142113.2-201ENSMUST00000217425 748 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm5455-201ENSMUST00000058710 715 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Olfr452-201ENSMUST00000075468 954 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Gm37370-201ENSMUST00000191996 1410 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.11□□□□□ -0.47
Retreg3Q9CQV4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Gm13296-201ENSMUST00000117854 997 ntBASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Gm12217-201ENSMUST00000118858 696 ntBASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Gm12176-201ENSMUST00000121420 875 ntBASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg3Q9CQV4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms