Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Gm43184-201ENSMUST00000197247 542 ntBASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Gm35960-201ENSMUST00000202712 767 ntBASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Gm8913-201ENSMUST00000209491 641 ntBASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Gm8385-201ENSMUST00000058999 643 ntBASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp1b1Q99LU0 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Gm28071-201ENSMUST00000190355 478 ntBASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 AY036118-201ENSMUST00000200021 923 ntBASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Rps4l-202ENSMUST00000204242 789 ntBASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Gm19208-201ENSMUST00000213861 912 ntBASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Chmp1b1Q99LU0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms