Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 AA914427-201ENSMUST00000193194 1166 ntBASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm45224-201ENSMUST00000208203 414 ntBASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm4157-201ENSMUST00000211647 679 ntBASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm17827-201ENSMUST00000211825 742 ntBASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Gm38266-201ENSMUST00000194931 421 ntBASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Gm9797-202ENSMUST00000218003 294 ntBASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
Cdk5rap3Q99LM2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk5rap3Q99LM2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gm15276-201ENSMUST00000145953 498 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gm3329-201ENSMUST00000159873 556 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gm5616-201ENSMUST00000165252 384 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gm8741-201ENSMUST00000174736 384 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms