Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm24749-201ENSMUST00000157838 343 ntBASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm26083-201ENSMUST00000157904 193 ntBASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm18065-201ENSMUST00000221395 526 ntBASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm270-201ENSMUST00000223010 976 ntBASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.69□□□□□ -0.86
H1fooQ8VIK3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm15711-201ENSMUST00000118889 535 ntBASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm15207-201ENSMUST00000119259 442 ntBASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.68□□□□□ -0.86
H1fooQ8VIK3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms