Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gm3329-201ENSMUST00000159873 556 ntBASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Mospd4-201ENSMUST00000180618 576 ntBASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gm27731-201ENSMUST00000185192 107 ntBASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gm37008-201ENSMUST00000195712 319 ntBASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nup35Q8R4R6 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nup35Q8R4R6 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm12015-201ENSMUST00000117065 843 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm38158-201ENSMUST00000194617 339 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm10312-201ENSMUST00000078515 489 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms