Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.62□□□□□ -0.39
Trim68Q8K243 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim68Q8K243 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim68Q8K243 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim68Q8K243 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim68Q8K243 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim68Q8K243 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim68Q8K243 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.62□□□□□ -0.39
Trim68Q8K243 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim68Q8K243 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim68Q8K243 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim68Q8K243 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.61□□□□□ -0.39
Trim68Q8K243 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim68Q8K243 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trim68Q8K243 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim68Q8K243 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.61□□□□□ -0.39
Trim68Q8K243 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim68Q8K243 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.61□□□□□ -0.39
Trim68Q8K243 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim68Q8K243 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim68Q8K243 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim68Q8K243 Gm14193-201ENSMUST00000105067 153 ntBASIC12.61□□□□□ -0.39
Trim68Q8K243 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Gm9630-201ENSMUST00000178304 885 ntBASIC12.61□□□□□ -0.39
Trim68Q8K243 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim68Q8K243 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.61□□□□□ -0.39
Trim68Q8K243 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim68Q8K243 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.61□□□□□ -0.39
Trim68Q8K243 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.61□□□□□ -0.39
Trim68Q8K243 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.61□□□□□ -0.39
Trim68Q8K243 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim68Q8K243 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim68Q8K243 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.6□□□□□ -0.39
Trim68Q8K243 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim68Q8K243 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.6□□□□□ -0.39
Trim68Q8K243 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm14219-201ENSMUST00000120414 288 ntBASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm8531-201ENSMUST00000188319 893 ntBASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm45594-201ENSMUST00000211717 241 ntBASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm9111-201ENSMUST00000219394 709 ntBASIC12.6□□□□□ -0.39
Trim68Q8K243 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.6□□□□□ -0.39
Trim68Q8K243 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.6□□□□□ -0.39
Trim68Q8K243 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim68Q8K243 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim68Q8K243 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms