Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Gm15744-201ENSMUST00000161734 213 ntBASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Gm3793-201ENSMUST00000204973 672 ntBASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Gm5468-202ENSMUST00000227851 682 ntBASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sh3rf2Q8BZT2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Gm4294-201ENSMUST00000105169 614 ntBASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms