Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Gm18038-201ENSMUST00000197900 485 ntBASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cpsf4Q8BQZ5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gm23596-201ENSMUST00000104304 132 ntBASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gm12566-201ENSMUST00000121479 359 ntBASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gm18734-201ENSMUST00000172937 808 ntBASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gm7848-201ENSMUST00000210739 718 ntBASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gm5369-201ENSMUST00000217499 588 ntBASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4Q8BQZ5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Cpsf4Q8BQZ5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms