Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gm44445-201ENSMUST00000204075 2683 ntBASIC12.29□□□□□ -0.44
CtifQ6PEE2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gm18893-201ENSMUST00000198416 943 ntBASIC12.29□□□□□ -0.44
CtifQ6PEE2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gm45925-201ENSMUST00000218882 744 ntBASIC12.29□□□□□ -0.44
CtifQ6PEE2 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.29□□□□□ -0.44
CtifQ6PEE2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.29□□□□□ -0.44
CtifQ6PEE2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gm21115-201ENSMUST00000187565 2578 ntBASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.29□□□□□ -0.44
CtifQ6PEE2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CtifQ6PEE2 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm12928-201ENSMUST00000117115 573 ntBASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm13369-201ENSMUST00000119442 987 ntBASIC12.28□□□□□ -0.44
CtifQ6PEE2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Mir1982-201ENSMUST00000157368 74 ntBASIC12.28□□□□□ -0.44
CtifQ6PEE2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm18624-201ENSMUST00000220966 658 ntBASIC12.28□□□□□ -0.44
CtifQ6PEE2 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm7357-201ENSMUST00000195361 2991 ntBASIC12.28□□□□□ -0.44
CtifQ6PEE2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.28□□□□□ -0.44
CtifQ6PEE2 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CtifQ6PEE2 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CtifQ6PEE2 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CtifQ6PEE2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.27□□□□□ -0.44
CtifQ6PEE2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CtifQ6PEE2 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CtifQ6PEE2 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CtifQ6PEE2 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CtifQ6PEE2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms