Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ctr9Q62018 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.68□□□□□ -0.22
Ctr9Q62018 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.68□□□□□ -0.22
Ctr9Q62018 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.67□□□□□ -0.22
Ctr9Q62018 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ctr9Q62018 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm14460-201ENSMUST00000121511 639 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.67□□□□□ -0.22
Ctr9Q62018 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ctr9Q62018 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ctr9Q62018 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm20495-201ENSMUST00000173902 235 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ctr9Q62018 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm37458-201ENSMUST00000194055 410 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm43852-201ENSMUST00000202098 917 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm44980-201ENSMUST00000205826 314 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.67□□□□□ -0.22
Ctr9Q62018 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.67□□□□□ -0.22
Ctr9Q62018 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.67□□□□□ -0.22
Ctr9Q62018 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Ctr9Q62018 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctr9Q62018 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.67□□□□□ -0.22
Ctr9Q62018 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ctr9Q62018 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ctr9Q62018 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctr9Q62018 CT025681.1-201ENSMUST00000225453 1855 ntBASIC13.66□□□□□ -0.22
Ctr9Q62018 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm25076-201ENSMUST00000104098 132 ntBASIC13.66□□□□□ -0.22
Ctr9Q62018 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm23771-201ENSMUST00000178702 110 ntBASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm27910-201ENSMUST00000185004 107 ntBASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm7504-201ENSMUST00000201449 424 ntBASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm44551-201ENSMUST00000208804 171 ntBASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm8342-201ENSMUST00000209839 757 ntBASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Ctr9Q62018 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.66□□□□□ -0.22
Ctr9Q62018 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.66□□□□□ -0.22
Ctr9Q62018 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.66□□□□□ -0.22
Ctr9Q62018 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.66□□□□□ -0.22
Ctr9Q62018 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctr9Q62018 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 236.9 ms