Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.67□□□□□ -0.7
Urb1Q571H0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm4034-201ENSMUST00000187674 480 ntBASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm7238-201ENSMUST00000206467 973 ntBASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.67□□□□□ -0.7
Urb1Q571H0 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.67□□□□□ -0.7
Urb1Q571H0 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.67□□□□□ -0.7
Urb1Q571H0 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.67□□□□□ -0.7
Urb1Q571H0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Urb1Q571H0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.66□□□□□ -0.7
Urb1Q571H0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm12663-201ENSMUST00000118481 958 ntBASIC10.66□□□□□ -0.7
Urb1Q571H0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm9135-201ENSMUST00000182963 990 ntBASIC10.66□□□□□ -0.7
Urb1Q571H0 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm45113-201ENSMUST00000207518 165 ntBASIC10.66□□□□□ -0.7
Urb1Q571H0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.66□□□□□ -0.7
Urb1Q571H0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.66□□□□□ -0.7
Urb1Q571H0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Urb1Q571H0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Urb1Q571H0 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.66□□□□□ -0.7
Urb1Q571H0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
Urb1Q571H0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
Urb1Q571H0 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Urb1Q571H0 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms