Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.88□□□□□ -0.35
Tpm1P58771 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tpm1P58771 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tpm1P58771 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tpm1P58771 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Tpm1P58771 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.87□□□□□ -0.35
Tpm1P58771 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Tpm1P58771 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.87□□□□□ -0.35
Tpm1P58771 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tpm1P58771 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.87□□□□□ -0.35
Tpm1P58771 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Gm11960-201ENSMUST00000122068 925 ntBASIC12.87□□□□□ -0.35
Tpm1P58771 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.87□□□□□ -0.35
Tpm1P58771 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.87□□□□□ -0.35
Tpm1P58771 Gm19287-201ENSMUST00000203190 358 ntBASIC12.87□□□□□ -0.35
Tpm1P58771 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.87□□□□□ -0.35
Tpm1P58771 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tpm1P58771 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tpm1P58771 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tpm1P58771 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.87□□□□□ -0.35
Tpm1P58771 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tpm1P58771 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.87□□□□□ -0.35
Tpm1P58771 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.87□□□□□ -0.35
Tpm1P58771 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.87□□□□□ -0.35
Tpm1P58771 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tpm1P58771 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tpm1P58771 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Gm42627-201ENSMUST00000197347 224 ntBASIC12.86□□□□□ -0.35
Tpm1P58771 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tpm1P58771 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tpm1P58771 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tpm1P58771 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tpm1P58771 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.86□□□□□ -0.35
Tpm1P58771 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.86□□□□□ -0.35
Tpm1P58771 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tpm1P58771 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.86□□□□□ -0.35
Tpm1P58771 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tpm1P58771 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.85□□□□□ -0.35
Tpm1P58771 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.85□□□□□ -0.35
Tpm1P58771 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Tpm1P58771 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.85□□□□□ -0.35
Tpm1P58771 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.85□□□□□ -0.35
Tpm1P58771 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms