Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NcanP55066 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.17□□□□□ -0.46
NcanP55066 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
NcanP55066 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.17□□□□□ -0.46
NcanP55066 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
NcanP55066 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NcanP55066 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NcanP55066 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.16□□□□□ -0.46
NcanP55066 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NcanP55066 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.16□□□□□ -0.46
NcanP55066 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
NcanP55066 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NcanP55066 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.16□□□□□ -0.46
NcanP55066 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NcanP55066 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
NcanP55066 Gm5071-201ENSMUST00000104922 1035 ntBASIC12.16□□□□□ -0.46
NcanP55066 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Gm11191-201ENSMUST00000117231 610 ntBASIC12.16□□□□□ -0.46
NcanP55066 Gm11736-201ENSMUST00000121468 505 ntBASIC12.16□□□□□ -0.46
NcanP55066 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.16□□□□□ -0.46
NcanP55066 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Gm23582-201ENSMUST00000158530 139 ntBASIC12.16□□□□□ -0.46
NcanP55066 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.16□□□□□ -0.46
NcanP55066 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NcanP55066 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
NcanP55066 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Gm38145-201ENSMUST00000192319 693 ntBASIC12.16□□□□□ -0.46
NcanP55066 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12.16□□□□□ -0.46
NcanP55066 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Gm18001-201ENSMUST00000212023 688 ntBASIC12.16□□□□□ -0.46
NcanP55066 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NcanP55066 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NcanP55066 Gm17541-201ENSMUST00000080062 525 ntBASIC12.16□□□□□ -0.46
NcanP55066 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NcanP55066 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.16□□□□□ -0.46
NcanP55066 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NcanP55066 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
NcanP55066 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Paupar-201ENSMUST00000194826 3482 ntBASIC12.15□□□□□ -0.46
NcanP55066 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.15□□□□□ -0.46
NcanP55066 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC12.15□□□□□ -0.46
NcanP55066 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.15□□□□□ -0.46
NcanP55066 Gm25735-201ENSMUST00000175164 215 ntBASIC12.15□□□□□ -0.46
NcanP55066 Gm6946-201ENSMUST00000182237 987 ntBASIC12.15□□□□□ -0.46
NcanP55066 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.15□□□□□ -0.46
NcanP55066 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.15□□□□□ -0.46
NcanP55066 Gm29548-201ENSMUST00000187012 694 ntBASIC12.15□□□□□ -0.46
NcanP55066 Gm28105-201ENSMUST00000187788 694 ntBASIC12.15□□□□□ -0.46
NcanP55066 Gm2566-201ENSMUST00000201267 431 ntBASIC12.15□□□□□ -0.46
NcanP55066 Gm42689-201ENSMUST00000202403 404 ntBASIC12.15□□□□□ -0.46
NcanP55066 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.15□□□□□ -0.46
NcanP55066 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms