Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.14□□□□□ -0.63
Sox3P53784 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.14□□□□□ -0.63
Sox3P53784 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.14□□□□□ -0.63
Sox3P53784 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox3P53784 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.14□□□□□ -0.63
Sox3P53784 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox3P53784 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.14□□□□□ -0.63
Sox3P53784 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Gm10288-201ENSMUST00000084614 537 ntBASIC11.14□□□□□ -0.63
Sox3P53784 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sox3P53784 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox3P53784 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox3P53784 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.14□□□□□ -0.63
Sox3P53784 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.14□□□□□ -0.63
Sox3P53784 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox3P53784 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox3P53784 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox3P53784 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Mir671-201ENSMUST00000102432 98 ntBASIC11.13□□□□□ -0.63
Sox3P53784 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox3P53784 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox3P53784 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Gm12857-201ENSMUST00000117678 592 ntBASIC11.13□□□□□ -0.63
Sox3P53784 Gm11354-201ENSMUST00000121974 422 ntBASIC11.13□□□□□ -0.63
Sox3P53784 Gm8737-201ENSMUST00000122208 642 ntBASIC11.13□□□□□ -0.63
Sox3P53784 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.13□□□□□ -0.63
Sox3P53784 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox3P53784 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox3P53784 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Gm5455-201ENSMUST00000058710 715 ntBASIC11.13□□□□□ -0.63
Sox3P53784 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.13□□□□□ -0.63
Sox3P53784 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox3P53784 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox3P53784 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.13□□□□□ -0.63
Sox3P53784 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox3P53784 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Sox3P53784 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox3P53784 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox3P53784 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.12□□□□□ -0.63
Sox3P53784 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Gm12990-201ENSMUST00000120372 468 ntBASIC11.12□□□□□ -0.63
Sox3P53784 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox3P53784 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Mir8115-201ENSMUST00000184992 119 ntBASIC11.12□□□□□ -0.63
Sox3P53784 Gm42657-201ENSMUST00000201746 211 ntBASIC11.12□□□□□ -0.63
Sox3P53784 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox3P53784 Gm45856-201ENSMUST00000212752 416 ntBASIC11.12□□□□□ -0.63
Sox3P53784 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox3P53784 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.12□□□□□ -0.63
Sox3P53784 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox3P53784 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms