Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Rfx3P48381 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.45□□□□□ -0.74
Rfx3P48381 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.45□□□□□ -0.74
Rfx3P48381 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.45□□□□□ -0.74
Rfx3P48381 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Gm25668-201ENSMUST00000157700 129 ntBASIC10.45□□□□□ -0.74
Rfx3P48381 Gm26083-201ENSMUST00000157904 193 ntBASIC10.45□□□□□ -0.74
Rfx3P48381 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 Gm4857-201ENSMUST00000192718 785 ntBASIC10.45□□□□□ -0.74
Rfx3P48381 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.45□□□□□ -0.74
Rfx3P48381 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Gm43962-201ENSMUST00000203898 190 ntBASIC10.45□□□□□ -0.74
Rfx3P48381 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.45□□□□□ -0.74
Rfx3P48381 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Rfx3P48381 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rfx3P48381 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rfx3P48381 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.45□□□□□ -0.74
Rfx3P48381 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.45□□□□□ -0.74
Rfx3P48381 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rfx3P48381 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.44□□□□□ -0.74
Rfx3P48381 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Rfx3P48381 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.44□□□□□ -0.74
Rfx3P48381 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Rfx3P48381 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Gm15236-201ENSMUST00000117309 379 ntBASIC10.44□□□□□ -0.74
Rfx3P48381 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.44□□□□□ -0.74
Rfx3P48381 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Rfx3P48381 Gm11660-201ENSMUST00000120955 412 ntBASIC10.44□□□□□ -0.74
Rfx3P48381 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Rfx3P48381 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.44□□□□□ -0.74
Rfx3P48381 Gm38317-201ENSMUST00000195564 343 ntBASIC10.44□□□□□ -0.74
Rfx3P48381 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.44□□□□□ -0.74
Rfx3P48381 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Rfx3P48381 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.44□□□□□ -0.74
Rfx3P48381 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.44□□□□□ -0.74
Rfx3P48381 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rfx3P48381 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms