Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Snora78-201ENSMUST00000158630 128 ntBASIC12.18□□□□□ -0.46
Rfc1P35601 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Gm9136-201ENSMUST00000193368 454 ntBASIC12.18□□□□□ -0.46
Rfc1P35601 Gm43433-201ENSMUST00000196573 481 ntBASIC12.18□□□□□ -0.46
Rfc1P35601 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.18□□□□□ -0.46
Rfc1P35601 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.18□□□□□ -0.46
Rfc1P35601 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rfc1P35601 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rfc1P35601 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rfc1P35601 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.17□□□□□ -0.46
Rfc1P35601 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Gm23912-201ENSMUST00000104687 87 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 Gm42937-201ENSMUST00000197360 752 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 Gm43002-201ENSMUST00000200310 155 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rfc1P35601 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.17□□□□□ -0.46
Rfc1P35601 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rfc1P35601 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rfc1P35601 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rfc1P35601 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rfc1P35601 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.16□□□□□ -0.46
Rfc1P35601 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rfc1P35601 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.16□□□□□ -0.46
Rfc1P35601 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Rfc1P35601 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Gm22018-201ENSMUST00000104357 131 ntBASIC12.16□□□□□ -0.46
Rfc1P35601 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.16□□□□□ -0.46
Rfc1P35601 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.16□□□□□ -0.46
Rfc1P35601 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfc1P35601 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.16□□□□□ -0.46
Rfc1P35601 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rfc1P35601 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Gm5370-201ENSMUST00000187187 574 ntBASIC12.16□□□□□ -0.46
Rfc1P35601 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfc1P35601 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.16□□□□□ -0.46
Rfc1P35601 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.16□□□□□ -0.46
Rfc1P35601 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.16□□□□□ -0.46
Rfc1P35601 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfc1P35601 Gm18165-201ENSMUST00000217426 928 ntBASIC12.16□□□□□ -0.46
Rfc1P35601 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.16□□□□□ -0.46
Rfc1P35601 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfc1P35601 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms