Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Gm18829-201ENSMUST00000188150 1622 ntBASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tnfrsf9P20334 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Gm19445-201ENSMUST00000193649 2438 ntBASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tnfrsf9P20334 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm12380-201ENSMUST00000119012 544 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm14999-201ENSMUST00000121039 624 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm9540-201ENSMUST00000188230 478 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm43084-201ENSMUST00000200696 947 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm4607-201ENSMUST00000206649 577 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 AC166992.1-201ENSMUST00000216356 565 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm10179-201ENSMUST00000086233 688 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tnfrsf9P20334 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Tnfrsf9P20334 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms