Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Gm37082-201ENSMUST00000192629 1927 ntBASIC9.28□□□□□ -0.92
Hoxd3P09027 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.28□□□□□ -0.92
Hoxd3P09027 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.28□□□□□ -0.92
Hoxd3P09027 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxd3P09027 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.28□□□□□ -0.92
Hoxd3P09027 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Hoxd3P09027 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Hoxd3P09027 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Hoxd3P09027 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.92
Hoxd3P09027 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.92
Hoxd3P09027 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Hoxd3P09027 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Hoxd3P09027 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Hoxd3P09027 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm9062-201ENSMUST00000117712 727 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm11858-201ENSMUST00000117935 838 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm5419-201ENSMUST00000119301 527 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm15610-201ENSMUST00000120584 195 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm11834-201ENSMUST00000122257 585 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm6918-201ENSMUST00000167622 1222 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm6098-201ENSMUST00000180234 330 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm42783-201ENSMUST00000197075 795 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm42782-201ENSMUST00000197286 522 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC9.27□□□□□ -0.93
Hoxd3P09027 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 AC115357.1-201ENSMUST00000227575 466 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.27□□□□□ -0.93
Hoxd3P09027 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxd3P09027 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
Hoxd3P09027 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms