Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cfdp1O88271 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cfdp1O88271 Gm3551-201ENSMUST00000190750 664 ntBASIC14.42□□□□□ -0.1
Cfdp1O88271 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.42□□□□□ -0.1
Cfdp1O88271 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Gm44315-201ENSMUST00000203041 219 ntBASIC14.42□□□□□ -0.1
Cfdp1O88271 Gm5996-201ENSMUST00000211110 718 ntBASIC14.42□□□□□ -0.1
Cfdp1O88271 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cfdp1O88271 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cfdp1O88271 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cfdp1O88271 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cfdp1O88271 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cfdp1O88271 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cfdp1O88271 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cfdp1O88271 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.41□□□□□ -0.1
Cfdp1O88271 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Gm15615-201ENSMUST00000118876 198 ntBASIC14.41□□□□□ -0.1
Cfdp1O88271 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.41□□□□□ -0.1
Cfdp1O88271 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Gm37458-201ENSMUST00000194055 410 ntBASIC14.41□□□□□ -0.1
Cfdp1O88271 Gm43520-201ENSMUST00000197996 164 ntBASIC14.41□□□□□ -0.1
Cfdp1O88271 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.41□□□□□ -0.1
Cfdp1O88271 Gm17825-201ENSMUST00000206836 794 ntBASIC14.41□□□□□ -0.1
Cfdp1O88271 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.41□□□□□ -0.1
Cfdp1O88271 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.41□□□□□ -0.1
Cfdp1O88271 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.41□□□□□ -0.1
Cfdp1O88271 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cfdp1O88271 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cfdp1O88271 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cfdp1O88271 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfdp1O88271 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.4□□□□□ -0.1
Cfdp1O88271 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cfdp1O88271 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Cfdp1O88271 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cfdp1O88271 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Gm23272-201ENSMUST00000104053 129 ntBASIC14.4□□□□□ -0.1
Cfdp1O88271 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Gm15329-201ENSMUST00000121408 155 ntBASIC14.4□□□□□ -0.1
Cfdp1O88271 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.4□□□□□ -0.1
Cfdp1O88271 Gm44551-201ENSMUST00000208804 171 ntBASIC14.4□□□□□ -0.1
Cfdp1O88271 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.4□□□□□ -0.1
Cfdp1O88271 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.4□□□□□ -0.1
Cfdp1O88271 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.4□□□□□ -0.1
Cfdp1O88271 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.4□□□□□ -0.1
Cfdp1O88271 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cfdp1O88271 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfdp1O88271 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.4□□□□□ -0.1
Cfdp1O88271 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.4□□□□□ -0.1
Cfdp1O88271 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Cfdp1O88271 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cfdp1O88271 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.39□□□□□ -0.11
Cfdp1O88271 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Erich3-203ENSMUST00000189969 3460 ntBASIC14.39□□□□□ -0.11
Cfdp1O88271 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfdp1O88271 Gm15549-201ENSMUST00000121595 622 ntBASIC14.39□□□□□ -0.11
Cfdp1O88271 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.39□□□□□ -0.11
Cfdp1O88271 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.39□□□□□ -0.11
Cfdp1O88271 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms