Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Alx4O35137 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.33□□□□□ -0.76
Alx4O35137 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.33□□□□□ -0.76
Alx4O35137 Gm11222-201ENSMUST00000119005 738 ntBASIC10.33□□□□□ -0.76
Alx4O35137 Gm11425-201ENSMUST00000119608 498 ntBASIC10.33□□□□□ -0.76
Alx4O35137 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.33□□□□□ -0.76
Alx4O35137 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Gm38002-201ENSMUST00000193255 180 ntBASIC10.33□□□□□ -0.76
Alx4O35137 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Alx4O35137 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Alx4O35137 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.33□□□□□ -0.76
Alx4O35137 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Gm9396-201ENSMUST00000076703 567 ntBASIC10.33□□□□□ -0.76
Alx4O35137 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Alx4O35137 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.33□□□□□ -0.76
Alx4O35137 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Alx4O35137 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Alx4O35137 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.33□□□□□ -0.76
Alx4O35137 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Alx4O35137 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Alx4O35137 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Alx4O35137 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Alx4O35137 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.32□□□□□ -0.76
Alx4O35137 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.32□□□□□ -0.76
Alx4O35137 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.32□□□□□ -0.76
Alx4O35137 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Alx4O35137 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.32□□□□□ -0.76
Alx4O35137 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Alx4O35137 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Alx4O35137 Gm11793-201ENSMUST00000120433 981 ntBASIC10.32□□□□□ -0.76
Alx4O35137 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.32□□□□□ -0.76
Alx4O35137 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.32□□□□□ -0.76
Alx4O35137 Snora78-201ENSMUST00000158630 128 ntBASIC10.32□□□□□ -0.76
Alx4O35137 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Alx4O35137 Gm37489-201ENSMUST00000191883 159 ntBASIC10.32□□□□□ -0.76
Alx4O35137 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.32□□□□□ -0.76
Alx4O35137 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Alx4O35137 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.32□□□□□ -0.76
Alx4O35137 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.32□□□□□ -0.76
Alx4O35137 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.32□□□□□ -0.76
Alx4O35137 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.32□□□□□ -0.76
Alx4O35137 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Alx4O35137 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.32□□□□□ -0.76
Alx4O35137 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.32□□□□□ -0.76
Alx4O35137 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Alx4O35137 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Alx4O35137 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.31□□□□□ -0.76
Alx4O35137 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Alx4O35137 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Alx4O35137 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Alx4O35137 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.31□□□□□ -0.76
Alx4O35137 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Alx4O35137 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Alx4O35137 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Alx4O35137 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Alx4O35137 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms