Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hps1O08983 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hps1O08983 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.81□□□□□ -0.68
Hps1O08983 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hps1O08983 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Hps1O08983 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hps1O08983 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.81□□□□□ -0.68
Hps1O08983 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.81□□□□□ -0.68
Hps1O08983 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Gm37444-201ENSMUST00000193605 439 ntBASIC10.81□□□□□ -0.68
Hps1O08983 Gm10109-202ENSMUST00000206890 1211 ntBASIC10.81□□□□□ -0.68
Hps1O08983 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.81□□□□□ -0.68
Hps1O08983 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Gm22058-201ENSMUST00000083393 310 ntBASIC10.81□□□□□ -0.68
Hps1O08983 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.81□□□□□ -0.68
Hps1O08983 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hps1O08983 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hps1O08983 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hps1O08983 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.8□□□□□ -0.68
Hps1O08983 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.8□□□□□ -0.68
Hps1O08983 Gm13570-201ENSMUST00000140763 309 ntBASIC10.8□□□□□ -0.68
Hps1O08983 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Gm2546-201ENSMUST00000182630 991 ntBASIC10.8□□□□□ -0.68
Hps1O08983 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 Mir7032-201ENSMUST00000185154 79 ntBASIC10.8□□□□□ -0.68
Hps1O08983 AA914427-201ENSMUST00000193194 1166 ntBASIC10.8□□□□□ -0.68
Hps1O08983 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.8□□□□□ -0.68
Hps1O08983 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.8□□□□□ -0.68
Hps1O08983 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hps1O08983 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hps1O08983 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hps1O08983 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.8□□□□□ -0.68
Hps1O08983 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.8□□□□□ -0.68
Hps1O08983 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hps1O08983 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hps1O08983 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.79□□□□□ -0.68
Hps1O08983 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hps1O08983 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hps1O08983 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hps1O08983 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms