Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK1AO00322 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK1AO00322 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK1AO00322 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
UPK1AO00322 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK1AO00322 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
UPK1AO00322 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
UPK1AO00322 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
UPK1AO00322 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.95□□□□□ -0.18
UPK1AO00322 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.95□□□□□ -0.18
UPK1AO00322 NME2P1-201ENST00000426182 414 ntBASIC13.95□□□□□ -0.18
UPK1AO00322 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 BCRP2-202ENST00000447763 634 ntBASIC13.95□□□□□ -0.18
UPK1AO00322 BCRP6-201ENST00000510112 632 ntBASIC13.95□□□□□ -0.18
UPK1AO00322 BCRP7-201ENST00000511549 544 ntBASIC13.95□□□□□ -0.18
UPK1AO00322 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.95□□□□□ -0.18
UPK1AO00322 AC233724.13-201ENST00000598383 410 ntBASIC13.95□□□□□ -0.18
UPK1AO00322 AC138696.2-201ENST00000607376 223 ntBASIC13.95□□□□□ -0.18
UPK1AO00322 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK1AO00322 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 AC138466.3-201ENST00000619983 221 ntBASIC13.95□□□□□ -0.18
UPK1AO00322 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK1AO00322 IGHV3-72-202ENST00000621503 303 ntBASIC13.95□□□□□ -0.18
UPK1AO00322 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK1AO00322 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK1AO00322 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
UPK1AO00322 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
UPK1AO00322 AC011840.2-201ENST00000563063 1520 ntBASIC13.95□□□□□ -0.18
UPK1AO00322 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1AO00322 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
UPK1AO00322 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
UPK1AO00322 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1AO00322 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1AO00322 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.94□□□□□ -0.18
UPK1AO00322 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.94□□□□□ -0.18
UPK1AO00322 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1AO00322 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 AC131206.1-201ENST00000538078 1211 ntBASIC13.94□□□□□ -0.18
UPK1AO00322 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
UPK1AO00322 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.94□□□□□ -0.18
UPK1AO00322 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.94□□□□□ -0.18
UPK1AO00322 BTNL10-201ENST00000595971 695 ntBASIC13.94□□□□□ -0.18
UPK1AO00322 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1AO00322 AC020910.5-201ENST00000623668 1865 ntBASIC13.94□□□□□ -0.18
UPK1AO00322 AC073548.1-201ENST00000624088 1882 ntBASIC13.94□□□□□ -0.18
UPK1AO00322 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1AO00322 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
UPK1AO00322 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1AO00322 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms