Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm11989-201ENSMUST00000117240 672 ntBASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Gm11362-201ENSMUST00000118838 850 ntBASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Gm14660-201ENSMUST00000119809 575 ntBASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.52□□□□□ -0.73
Shisa8J3QNX5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.52□□□□□ -0.73
Shisa8J3QNX5 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Mir1247-201ENSMUST00000116706 82 ntBASIC10.51□□□□□ -0.73
Shisa8J3QNX5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.51□□□□□ -0.73
Shisa8J3QNX5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Shisa8J3QNX5 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms