Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcf11G3X9Z4 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Gm43972-201ENSMUST00000181398 1467 ntBASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Gm5529-201ENSMUST00000165691 891 ntBASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 AC134601.2-201ENSMUST00000221071 130 ntBASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcf11G3X9Z4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Gm16167-201ENSMUST00000160428 1065 ntBASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Gm42499-201ENSMUST00000196193 1412 ntBASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcf11G3X9Z4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcf11G3X9Z4 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Pcf11G3X9Z4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcf11G3X9Z4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Gm6158-201ENSMUST00000109467 904 ntBASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Gm11475-201ENSMUST00000118482 476 ntBASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Platr10-202ENSMUST00000191479 818 ntBASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Ighv5-8-202ENSMUST00000191967 337 ntBASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Gm37782-201ENSMUST00000194879 678 ntBASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 CT030166.5-201ENSMUST00000222249 420 ntBASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcf11G3X9Z4 Gm12745-201ENSMUST00000121767 214 ntBASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Gm7902-201ENSMUST00000198842 947 ntBASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Gm19640-201ENSMUST00000214849 464 ntBASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 CT010480.2-201ENSMUST00000225424 737 ntBASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcf11G3X9Z4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms