Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Gm44428-201ENSMUST00000204474 874 ntBASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Gm5493S4R2D1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm5493S4R2D1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms