Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5493S4R2D1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5493S4R2D1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Gm44428-201ENSMUST00000204474 874 ntBASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5493S4R2D1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Gm5493S4R2D1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5493S4R2D1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Gm5493S4R2D1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm5493S4R2D1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Gm5493S4R2D1 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Gm5493S4R2D1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms