Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl40Q9Z2Q5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl40Q9Z2Q5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Mrpl40Q9Z2Q5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Mrpl40Q9Z2Q5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Mrpl40Q9Z2Q5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mrpl40Q9Z2Q5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Mrpl40Q9Z2Q5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl40Q9Z2Q5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl40Q9Z2Q5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl40Q9Z2Q5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl40Q9Z2Q5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl40Q9Z2Q5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl40Q9Z2Q5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mrpl40Q9Z2Q5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl40Q9Z2Q5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl40Q9Z2Q5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl40Q9Z2Q5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mrpl40Q9Z2Q5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl40Q9Z2Q5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl40Q9Z2Q5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Mrpl40Q9Z2Q5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.22■□□□□ 0.83
Mrpl40Q9Z2Q5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.21■□□□□ 0.83
Mrpl40Q9Z2Q5 Golgb1-201ENSMUST00000023534 498 ntBASIC20.21■□□□□ 0.83
Mrpl40Q9Z2Q5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mrpl40Q9Z2Q5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mrpl40Q9Z2Q5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mrpl40Q9Z2Q5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mrpl40Q9Z2Q5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl40Q9Z2Q5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl40Q9Z2Q5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl40Q9Z2Q5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.2■□□□□ 0.82
Mrpl40Q9Z2Q5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl40Q9Z2Q5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Mrpl40Q9Z2Q5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl40Q9Z2Q5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl40Q9Z2Q5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl40Q9Z2Q5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.19■□□□□ 0.82
Mrpl40Q9Z2Q5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl40Q9Z2Q5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mrpl40Q9Z2Q5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl40Q9Z2Q5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mrpl40Q9Z2Q5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mrpl40Q9Z2Q5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Mrpl40Q9Z2Q5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms