Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn6Q9Z262 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cldn6Q9Z262 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn6Q9Z262 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn6Q9Z262 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn6Q9Z262 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.17■□□□□ 0.66
Cldn6Q9Z262 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.17■□□□□ 0.66
Cldn6Q9Z262 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cldn6Q9Z262 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cldn6Q9Z262 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cldn6Q9Z262 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn6Q9Z262 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.16■□□□□ 0.66
Cldn6Q9Z262 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.16■□□□□ 0.66
Cldn6Q9Z262 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.15■□□□□ 0.66
Cldn6Q9Z262 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.15■□□□□ 0.66
Cldn6Q9Z262 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.15■□□□□ 0.66
Cldn6Q9Z262 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.15■□□□□ 0.66
Cldn6Q9Z262 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn6Q9Z262 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn6Q9Z262 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cldn6Q9Z262 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn6Q9Z262 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Cldn6Q9Z262 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn6Q9Z262 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn6Q9Z262 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn6Q9Z262 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn6Q9Z262 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.14■□□□□ 0.65
Cldn6Q9Z262 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn6Q9Z262 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn6Q9Z262 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.13■□□□□ 0.65
Cldn6Q9Z262 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn6Q9Z262 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn6Q9Z262 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn6Q9Z262 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn6Q9Z262 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.13■□□□□ 0.65
Cldn6Q9Z262 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Cldn6Q9Z262 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cldn6Q9Z262 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cldn6Q9Z262 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn6Q9Z262 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.11■□□□□ 0.65
Cldn6Q9Z262 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn6Q9Z262 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn6Q9Z262 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn6Q9Z262 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cldn6Q9Z262 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn6Q9Z262 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn6Q9Z262 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn6Q9Z262 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn6Q9Z262 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn6Q9Z262 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn6Q9Z262 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn6Q9Z262 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cldn6Q9Z262 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn6Q9Z262 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn6Q9Z262 Gm7417-201ENSMUST00000192950 473 ntBASIC19.07■□□□□ 0.64
Cldn6Q9Z262 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.07■□□□□ 0.64
Cldn6Q9Z262 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn6Q9Z262 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn6Q9Z262 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms