Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim3Q9R1R2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim3Q9R1R2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim3Q9R1R2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim3Q9R1R2 Gm7417-201ENSMUST00000192950 473 ntBASIC19.12■□□□□ 0.65
Trim3Q9R1R2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim3Q9R1R2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.12■□□□□ 0.65
Trim3Q9R1R2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim3Q9R1R2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim3Q9R1R2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim3Q9R1R2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.11■□□□□ 0.65
Trim3Q9R1R2 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim3Q9R1R2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim3Q9R1R2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim3Q9R1R2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim3Q9R1R2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim3Q9R1R2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim3Q9R1R2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim3Q9R1R2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim3Q9R1R2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim3Q9R1R2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim3Q9R1R2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim3Q9R1R2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim3Q9R1R2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trim3Q9R1R2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim3Q9R1R2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim3Q9R1R2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim3Q9R1R2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim3Q9R1R2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim3Q9R1R2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim3Q9R1R2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim3Q9R1R2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim3Q9R1R2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.07■□□□□ 0.64
Trim3Q9R1R2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim3Q9R1R2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim3Q9R1R2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim3Q9R1R2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Trim3Q9R1R2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim3Q9R1R2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim3Q9R1R2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim3Q9R1R2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.06■□□□□ 0.64
Trim3Q9R1R2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim3Q9R1R2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim3Q9R1R2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim3Q9R1R2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.04■□□□□ 0.64
Trim3Q9R1R2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim3Q9R1R2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim3Q9R1R2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim3Q9R1R2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim3Q9R1R2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim3Q9R1R2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim3Q9R1R2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.03■□□□□ 0.64
Trim3Q9R1R2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim3Q9R1R2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim3Q9R1R2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim3Q9R1R2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms