Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Crlf1Q9JM58 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crlf1Q9JM58 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crlf1Q9JM58 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Crlf1Q9JM58 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crlf1Q9JM58 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.51■□□□□ 0.23
Crlf1Q9JM58 Gm22325-201ENSMUST00000158904 308 ntBASIC16.51■□□□□ 0.23
Crlf1Q9JM58 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crlf1Q9JM58 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crlf1Q9JM58 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crlf1Q9JM58 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crlf1Q9JM58 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Crlf1Q9JM58 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crlf1Q9JM58 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Crlf1Q9JM58 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crlf1Q9JM58 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crlf1Q9JM58 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Crlf1Q9JM58 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crlf1Q9JM58 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Crlf1Q9JM58 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.49■□□□□ 0.23
Crlf1Q9JM58 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Crlf1Q9JM58 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crlf1Q9JM58 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Crlf1Q9JM58 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crlf1Q9JM58 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.49■□□□□ 0.23
Crlf1Q9JM58 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crlf1Q9JM58 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.48■□□□□ 0.23
Crlf1Q9JM58 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crlf1Q9JM58 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crlf1Q9JM58 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Crlf1Q9JM58 Gm12441-201ENSMUST00000121806 588 ntBASIC16.47■□□□□ 0.23
Crlf1Q9JM58 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.47■□□□□ 0.23
Crlf1Q9JM58 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Crlf1Q9JM58 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Crlf1Q9JM58 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.47■□□□□ 0.23
Crlf1Q9JM58 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crlf1Q9JM58 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crlf1Q9JM58 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Crlf1Q9JM58 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Gm11421-201ENSMUST00000122124 294 ntBASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Gm10653-202ENSMUST00000139570 835 ntBASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Gm22240-201ENSMUST00000175225 82 ntBASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crlf1Q9JM58 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Crlf1Q9JM58 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crlf1Q9JM58 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Crlf1Q9JM58 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Crlf1Q9JM58 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.44■□□□□ 0.22
Crlf1Q9JM58 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Crlf1Q9JM58 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.44■□□□□ 0.22
Crlf1Q9JM58 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crlf1Q9JM58 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms