Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rbfox1Q9JJ43 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rbfox1Q9JJ43 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbfox1Q9JJ43 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbfox1Q9JJ43 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rbfox1Q9JJ43 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rbfox1Q9JJ43 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox1Q9JJ43 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox1Q9JJ43 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox1Q9JJ43 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox1Q9JJ43 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox1Q9JJ43 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox1Q9JJ43 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox1Q9JJ43 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox1Q9JJ43 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rbfox1Q9JJ43 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Gm45444-201ENSMUST00000211394 898 ntBASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rbfox1Q9JJ43 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rbfox1Q9JJ43 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rbfox1Q9JJ43 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rbfox1Q9JJ43 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rbfox1Q9JJ43 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rbfox1Q9JJ43 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rbfox1Q9JJ43 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rbfox1Q9JJ43 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.37■□□□□ 0.37
Rbfox1Q9JJ43 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rbfox1Q9JJ43 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rbfox1Q9JJ43 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rbfox1Q9JJ43 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rbfox1Q9JJ43 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.34■□□□□ 0.37
Rbfox1Q9JJ43 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.34■□□□□ 0.37
Rbfox1Q9JJ43 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rbfox1Q9JJ43 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rbfox1Q9JJ43 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rbfox1Q9JJ43 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rbfox1Q9JJ43 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rbfox1Q9JJ43 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rbfox1Q9JJ43 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Rbfox1Q9JJ43 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rbfox1Q9JJ43 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rbfox1Q9JJ43 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.33■□□□□ 0.36
Rbfox1Q9JJ43 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rbfox1Q9JJ43 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rbfox1Q9JJ43 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rbfox1Q9JJ43 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rbfox1Q9JJ43 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rbfox1Q9JJ43 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms