Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rtp4Q9ER80 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtp4Q9ER80 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rtp4Q9ER80 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtp4Q9ER80 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtp4Q9ER80 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtp4Q9ER80 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rtp4Q9ER80 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.08■□□□□ 0.64
Rtp4Q9ER80 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtp4Q9ER80 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rtp4Q9ER80 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtp4Q9ER80 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtp4Q9ER80 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rtp4Q9ER80 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtp4Q9ER80 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtp4Q9ER80 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Rtp4Q9ER80 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtp4Q9ER80 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.07■□□□□ 0.64
Rtp4Q9ER80 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtp4Q9ER80 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtp4Q9ER80 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtp4Q9ER80 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtp4Q9ER80 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.06■□□□□ 0.64
Rtp4Q9ER80 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtp4Q9ER80 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtp4Q9ER80 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rtp4Q9ER80 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.06■□□□□ 0.64
Rtp4Q9ER80 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.06■□□□□ 0.64
Rtp4Q9ER80 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.06■□□□□ 0.64
Rtp4Q9ER80 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtp4Q9ER80 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rtp4Q9ER80 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtp4Q9ER80 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.04■□□□□ 0.64
Rtp4Q9ER80 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rtp4Q9ER80 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rtp4Q9ER80 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtp4Q9ER80 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtp4Q9ER80 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtp4Q9ER80 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.03■□□□□ 0.64
Rtp4Q9ER80 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Rtp4Q9ER80 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rtp4Q9ER80 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtp4Q9ER80 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtp4Q9ER80 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtp4Q9ER80 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rtp4Q9ER80 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rtp4Q9ER80 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtp4Q9ER80 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtp4Q9ER80 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtp4Q9ER80 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.01■□□□□ 0.63
Rtp4Q9ER80 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rtp4Q9ER80 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtp4Q9ER80 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtp4Q9ER80 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rtp4Q9ER80 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rtp4Q9ER80 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtp4Q9ER80 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rtp4Q9ER80 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtp4Q9ER80 Golgb1-201ENSMUST00000023534 498 ntBASIC19■□□□□ 0.63
Rtp4Q9ER80 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rtp4Q9ER80 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rtp4Q9ER80 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtp4Q9ER80 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtp4Q9ER80 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtp4Q9ER80 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtp4Q9ER80 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.99■□□□□ 0.63
Rtp4Q9ER80 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rtp4Q9ER80 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms