Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp8Q9DB85 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp8Q9DB85 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp8Q9DB85 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp8Q9DB85 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.08■□□□□ 0.81
Rrp8Q9DB85 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp8Q9DB85 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp8Q9DB85 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp8Q9DB85 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp8Q9DB85 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rrp8Q9DB85 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp8Q9DB85 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Rrp8Q9DB85 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
Rrp8Q9DB85 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.07■□□□□ 0.8
Rrp8Q9DB85 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp8Q9DB85 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp8Q9DB85 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp8Q9DB85 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp8Q9DB85 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp8Q9DB85 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp8Q9DB85 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp8Q9DB85 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp8Q9DB85 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp8Q9DB85 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.06■□□□□ 0.8
Rrp8Q9DB85 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp8Q9DB85 Gm10493-201ENSMUST00000097270 612 ntBASIC20.06■□□□□ 0.8
Rrp8Q9DB85 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.05■□□□□ 0.8
Rrp8Q9DB85 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.05■□□□□ 0.8
Rrp8Q9DB85 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp8Q9DB85 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.04■□□□□ 0.8
Rrp8Q9DB85 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rrp8Q9DB85 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rrp8Q9DB85 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.04■□□□□ 0.8
Rrp8Q9DB85 Gm7291-201ENSMUST00000199147 382 ntBASIC20.04■□□□□ 0.8
Rrp8Q9DB85 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rrp8Q9DB85 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rrp8Q9DB85 Gm42569-201ENSMUST00000200539 472 ntBASIC20.03■□□□□ 0.8
Rrp8Q9DB85 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rrp8Q9DB85 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.03■□□□□ 0.8
Rrp8Q9DB85 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rrp8Q9DB85 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rrp8Q9DB85 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rrp8Q9DB85 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rrp8Q9DB85 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rrp8Q9DB85 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rrp8Q9DB85 Gm40848-201ENSMUST00000221998 324 ntBASIC20.02■□□□□ 0.8
Rrp8Q9DB85 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Rrp8Q9DB85 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rrp8Q9DB85 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Rrp8Q9DB85 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rrp8Q9DB85 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rrp8Q9DB85 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rrp8Q9DB85 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rrp8Q9DB85 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rrp8Q9DB85 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rrp8Q9DB85 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20■□□□□ 0.79
Rrp8Q9DB85 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Rrp8Q9DB85 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rrp8Q9DB85 Gm10209-201ENSMUST00000203397 1607 ntBASIC20■□□□□ 0.79
Rrp8Q9DB85 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rrp8Q9DB85 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rrp8Q9DB85 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rrp8Q9DB85 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rrp8Q9DB85 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rrp8Q9DB85 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.99■□□□□ 0.79
Rrp8Q9DB85 Gm42642-201ENSMUST00000200683 355 ntBASIC19.99■□□□□ 0.79
Rrp8Q9DB85 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.99■□□□□ 0.79
Rrp8Q9DB85 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.99■□□□□ 0.79
Rrp8Q9DB85 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rrp8Q9DB85 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rrp8Q9DB85 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rrp8Q9DB85 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rrp8Q9DB85 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rrp8Q9DB85 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rrp8Q9DB85 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.98■□□□□ 0.79
Rrp8Q9DB85 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.98■□□□□ 0.79
Rrp8Q9DB85 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.98■□□□□ 0.79
Rrp8Q9DB85 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.98■□□□□ 0.79
Rrp8Q9DB85 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.98■□□□□ 0.79
Rrp8Q9DB85 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.98■□□□□ 0.79
Rrp8Q9DB85 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 154.1 ms