Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Calr3Q9D9Q6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Calr3Q9D9Q6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Calr3Q9D9Q6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Calr3Q9D9Q6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calr3Q9D9Q6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calr3Q9D9Q6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calr3Q9D9Q6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Calr3Q9D9Q6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Calr3Q9D9Q6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Calr3Q9D9Q6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.07■□□□□ 0.96
Calr3Q9D9Q6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Calr3Q9D9Q6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calr3Q9D9Q6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Calr3Q9D9Q6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calr3Q9D9Q6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calr3Q9D9Q6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calr3Q9D9Q6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.06■□□□□ 0.96
Calr3Q9D9Q6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calr3Q9D9Q6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calr3Q9D9Q6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calr3Q9D9Q6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calr3Q9D9Q6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calr3Q9D9Q6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.05■□□□□ 0.96
Calr3Q9D9Q6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calr3Q9D9Q6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calr3Q9D9Q6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calr3Q9D9Q6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calr3Q9D9Q6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.04■□□□□ 0.96
Calr3Q9D9Q6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Calr3Q9D9Q6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.04■□□□□ 0.96
Calr3Q9D9Q6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Calr3Q9D9Q6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calr3Q9D9Q6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calr3Q9D9Q6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calr3Q9D9Q6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Calr3Q9D9Q6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calr3Q9D9Q6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calr3Q9D9Q6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Calr3Q9D9Q6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Calr3Q9D9Q6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calr3Q9D9Q6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calr3Q9D9Q6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calr3Q9D9Q6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calr3Q9D9Q6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Calr3Q9D9Q6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Calr3Q9D9Q6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.02■□□□□ 0.96
Calr3Q9D9Q6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Calr3Q9D9Q6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Calr3Q9D9Q6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Calr3Q9D9Q6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Calr3Q9D9Q6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Calr3Q9D9Q6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Calr3Q9D9Q6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Calr3Q9D9Q6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Calr3Q9D9Q6 Gm9939-201ENSMUST00000067161 1154 ntBASIC21■□□□□ 0.95
Calr3Q9D9Q6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Calr3Q9D9Q6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Calr3Q9D9Q6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Calr3Q9D9Q6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Calr3Q9D9Q6 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.99■□□□□ 0.95
Calr3Q9D9Q6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Calr3Q9D9Q6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Calr3Q9D9Q6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Calr3Q9D9Q6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Calr3Q9D9Q6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Calr3Q9D9Q6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Calr3Q9D9Q6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Calr3Q9D9Q6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.98■□□□□ 0.95
Calr3Q9D9Q6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Calr3Q9D9Q6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Calr3Q9D9Q6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Calr3Q9D9Q6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Calr3Q9D9Q6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Calr3Q9D9Q6 Gm6821-201ENSMUST00000107540 542 ntBASIC20.97■□□□□ 0.95
Calr3Q9D9Q6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.96■□□□□ 0.95
Calr3Q9D9Q6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms