Protein–RNA interactions for Protein: Q9D7D7

Cldn23, Claudin-23, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn23Q9D7D7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Cldn23Q9D7D7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn23Q9D7D7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.22■□□□□ 0.35
Cldn23Q9D7D7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn23Q9D7D7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn23Q9D7D7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn23Q9D7D7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn23Q9D7D7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn23Q9D7D7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn23Q9D7D7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn23Q9D7D7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Gm27454-201ENSMUST00000185090 204 ntBASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.2■□□□□ 0.34
Cldn23Q9D7D7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn23Q9D7D7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cldn23Q9D7D7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn23Q9D7D7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cldn23Q9D7D7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn23Q9D7D7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn23Q9D7D7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cldn23Q9D7D7 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.17■□□□□ 0.34
Cldn23Q9D7D7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn23Q9D7D7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.17■□□□□ 0.34
Cldn23Q9D7D7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn23Q9D7D7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn23Q9D7D7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Cldn23Q9D7D7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Cldn23Q9D7D7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn23Q9D7D7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cldn23Q9D7D7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn23Q9D7D7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Gm45417-201ENSMUST00000209533 758 ntBASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn23Q9D7D7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms