Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Gm7143-201ENSMUST00000222811 859 ntBASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cthrc1Q9D1D6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cthrc1Q9D1D6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cthrc1Q9D1D6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cthrc1Q9D1D6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cthrc1Q9D1D6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cthrc1Q9D1D6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cthrc1Q9D1D6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
Cthrc1Q9D1D6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cthrc1Q9D1D6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cthrc1Q9D1D6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cthrc1Q9D1D6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cthrc1Q9D1D6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cthrc1Q9D1D6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.02■□□□□ 0.64
Cthrc1Q9D1D6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cthrc1Q9D1D6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.02■□□□□ 0.63
Cthrc1Q9D1D6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cthrc1Q9D1D6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cthrc1Q9D1D6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cthrc1Q9D1D6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Cthrc1Q9D1D6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cthrc1Q9D1D6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cthrc1Q9D1D6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cthrc1Q9D1D6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cthrc1Q9D1D6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cthrc1Q9D1D6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cthrc1Q9D1D6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cthrc1Q9D1D6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cthrc1Q9D1D6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Gm13241-201ENSMUST00000094493 780 ntBASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Gm10616-201ENSMUST00000205285 2127 ntBASIC19■□□□□ 0.63
Cthrc1Q9D1D6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cthrc1Q9D1D6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cthrc1Q9D1D6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cthrc1Q9D1D6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cthrc1Q9D1D6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.99■□□□□ 0.63
Cthrc1Q9D1D6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cthrc1Q9D1D6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cthrc1Q9D1D6 Gm9847-201ENSMUST00000052528 599 ntBASIC18.99■□□□□ 0.63
Cthrc1Q9D1D6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cthrc1Q9D1D6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cthrc1Q9D1D6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cthrc1Q9D1D6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.98■□□□□ 0.63
Cthrc1Q9D1D6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cthrc1Q9D1D6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Cthrc1Q9D1D6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cthrc1Q9D1D6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cthrc1Q9D1D6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cthrc1Q9D1D6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cthrc1Q9D1D6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cthrc1Q9D1D6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cthrc1Q9D1D6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cthrc1Q9D1D6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cthrc1Q9D1D6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.97■□□□□ 0.63
Cthrc1Q9D1D6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cthrc1Q9D1D6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cthrc1Q9D1D6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cthrc1Q9D1D6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cthrc1Q9D1D6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.96■□□□□ 0.63
Cthrc1Q9D1D6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Cthrc1Q9D1D6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cthrc1Q9D1D6 Gm9870-201ENSMUST00000063874 645 ntBASIC18.96■□□□□ 0.63
Cthrc1Q9D1D6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cthrc1Q9D1D6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 Gm21956-201ENSMUST00000179946 522 ntBASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cthrc1Q9D1D6 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.94■□□□□ 0.62
Cthrc1Q9D1D6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cthrc1Q9D1D6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Cthrc1Q9D1D6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cthrc1Q9D1D6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cthrc1Q9D1D6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cthrc1Q9D1D6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.94■□□□□ 0.62
Cthrc1Q9D1D6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.94■□□□□ 0.62
Cthrc1Q9D1D6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cthrc1Q9D1D6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms