Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ssr1Q9CY50 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.11
Ssr1Q9CY50 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ssr1Q9CY50 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ssr1Q9CY50 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ssr1Q9CY50 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ssr1Q9CY50 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssr1Q9CY50 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ssr1Q9CY50 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ssr1Q9CY50 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ssr1Q9CY50 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ssr1Q9CY50 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ssr1Q9CY50 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ssr1Q9CY50 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ssr1Q9CY50 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ssr1Q9CY50 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ssr1Q9CY50 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ssr1Q9CY50 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ssr1Q9CY50 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ssr1Q9CY50 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ssr1Q9CY50 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ssr1Q9CY50 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.9■■□□□ 1.1
Ssr1Q9CY50 Gm45444-201ENSMUST00000211394 898 ntBASIC21.9■■□□□ 1.1
Ssr1Q9CY50 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Ssr1Q9CY50 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ssr1Q9CY50 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ssr1Q9CY50 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ssr1Q9CY50 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Ssr1Q9CY50 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ssr1Q9CY50 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ssr1Q9CY50 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.89■■□□□ 1.09
Ssr1Q9CY50 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ssr1Q9CY50 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ssr1Q9CY50 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Ssr1Q9CY50 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ssr1Q9CY50 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.88■■□□□ 1.09
Ssr1Q9CY50 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.88■■□□□ 1.09
Ssr1Q9CY50 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ssr1Q9CY50 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ssr1Q9CY50 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ssr1Q9CY50 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ssr1Q9CY50 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ssr1Q9CY50 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ssr1Q9CY50 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Ssr1Q9CY50 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ssr1Q9CY50 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Ssr1Q9CY50 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Ssr1Q9CY50 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ssr1Q9CY50 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ssr1Q9CY50 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms