Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rnf135Q9CWS1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf135Q9CWS1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rnf135Q9CWS1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf135Q9CWS1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf135Q9CWS1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf135Q9CWS1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 Gm10232-201ENSMUST00000089221 720 ntBASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf135Q9CWS1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf135Q9CWS1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf135Q9CWS1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf135Q9CWS1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.2■□□□□ 0.98
Rnf135Q9CWS1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf135Q9CWS1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rnf135Q9CWS1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf135Q9CWS1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf135Q9CWS1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf135Q9CWS1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf135Q9CWS1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf135Q9CWS1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf135Q9CWS1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rnf135Q9CWS1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf135Q9CWS1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf135Q9CWS1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rnf135Q9CWS1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf135Q9CWS1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf135Q9CWS1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf135Q9CWS1 Etf1-202ENSMUST00000180351 108 ntBASIC21.18■□□□□ 0.98
Rnf135Q9CWS1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Rnf135Q9CWS1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf135Q9CWS1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf135Q9CWS1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Rnf135Q9CWS1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf135Q9CWS1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rnf135Q9CWS1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf135Q9CWS1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf135Q9CWS1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf135Q9CWS1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf135Q9CWS1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf135Q9CWS1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf135Q9CWS1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf135Q9CWS1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf135Q9CWS1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf135Q9CWS1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf135Q9CWS1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf135Q9CWS1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf135Q9CWS1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf135Q9CWS1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.15■□□□□ 0.98
Rnf135Q9CWS1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf135Q9CWS1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms