Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim34aQ99PP6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim34aQ99PP6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim34aQ99PP6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Trim34aQ99PP6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Trim34aQ99PP6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Trim34aQ99PP6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim34aQ99PP6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim34aQ99PP6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim34aQ99PP6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC25.38■■□□□ 1.65
Trim34aQ99PP6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim34aQ99PP6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.37■■□□□ 1.65
Trim34aQ99PP6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Trim34aQ99PP6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Trim34aQ99PP6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Trim34aQ99PP6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim34aQ99PP6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim34aQ99PP6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim34aQ99PP6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim34aQ99PP6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC25.35■■□□□ 1.65
Trim34aQ99PP6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC25.35■■□□□ 1.65
Trim34aQ99PP6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC25.35■■□□□ 1.65
Trim34aQ99PP6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trim34aQ99PP6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.35■■□□□ 1.65
Trim34aQ99PP6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trim34aQ99PP6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Trim34aQ99PP6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim34aQ99PP6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim34aQ99PP6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
Trim34aQ99PP6 Gm43060-201ENSMUST00000200621 289 ntBASIC25.34■■□□□ 1.65
Trim34aQ99PP6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC25.34■■□□□ 1.65
Trim34aQ99PP6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Trim34aQ99PP6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC25.34■■□□□ 1.65
Trim34aQ99PP6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Trim34aQ99PP6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim34aQ99PP6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim34aQ99PP6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Trim34aQ99PP6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Trim34aQ99PP6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim34aQ99PP6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim34aQ99PP6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim34aQ99PP6 Gm10209-201ENSMUST00000203397 1607 ntBASIC25.33■■□□□ 1.65
Trim34aQ99PP6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim34aQ99PP6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
Trim34aQ99PP6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim34aQ99PP6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim34aQ99PP6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trim34aQ99PP6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trim34aQ99PP6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Trim34aQ99PP6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim34aQ99PP6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC25.31■■□□□ 1.64
Trim34aQ99PP6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trim34aQ99PP6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trim34aQ99PP6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim34aQ99PP6 AC164629.5-201ENSMUST00000220387 632 ntBASIC25.3■■□□□ 1.64
Trim34aQ99PP6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim34aQ99PP6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim34aQ99PP6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim34aQ99PP6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim34aQ99PP6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Trim34aQ99PP6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim34aQ99PP6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Trim34aQ99PP6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Trim34aQ99PP6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim34aQ99PP6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim34aQ99PP6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim34aQ99PP6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.28■■□□□ 1.64
Trim34aQ99PP6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Trim34aQ99PP6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Trim34aQ99PP6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Trim34aQ99PP6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC25.27■■□□□ 1.64
Trim34aQ99PP6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim34aQ99PP6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim34aQ99PP6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim34aQ99PP6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim34aQ99PP6 Gm40848-201ENSMUST00000221998 324 ntBASIC25.26■■□□□ 1.63
Trim34aQ99PP6 Gm10493-201ENSMUST00000097270 612 ntBASIC25.26■■□□□ 1.63
Trim34aQ99PP6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim34aQ99PP6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim34aQ99PP6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim34aQ99PP6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim34aQ99PP6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim34aQ99PP6 Gm43403-201ENSMUST00000198011 1786 ntBASIC25.25■■□□□ 1.63
Trim34aQ99PP6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim34aQ99PP6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC25.24■■□□□ 1.63
Trim34aQ99PP6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Trim34aQ99PP6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim34aQ99PP6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC25.24■■□□□ 1.63
Trim34aQ99PP6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Trim34aQ99PP6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Trim34aQ99PP6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms