Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf111Q99ML9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf111Q99ML9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf111Q99ML9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rnf111Q99ML9 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.78■□□□□ 0.76
Rnf111Q99ML9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.78■□□□□ 0.76
Rnf111Q99ML9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf111Q99ML9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.78■□□□□ 0.76
Rnf111Q99ML9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.78■□□□□ 0.76
Rnf111Q99ML9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Rnf111Q99ML9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rnf111Q99ML9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf111Q99ML9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf111Q99ML9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rnf111Q99ML9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Rnf111Q99ML9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf111Q99ML9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf111Q99ML9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf111Q99ML9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rnf111Q99ML9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf111Q99ML9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rnf111Q99ML9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf111Q99ML9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf111Q99ML9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf111Q99ML9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf111Q99ML9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.76■□□□□ 0.75
Rnf111Q99ML9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf111Q99ML9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf111Q99ML9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Rnf111Q99ML9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf111Q99ML9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf111Q99ML9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf111Q99ML9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf111Q99ML9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rnf111Q99ML9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.71■□□□□ 0.75
Rnf111Q99ML9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms