Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trps1Q925H1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trps1Q925H1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trps1Q925H1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trps1Q925H1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.24■□□□□ 0.99
Trps1Q925H1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trps1Q925H1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trps1Q925H1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trps1Q925H1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trps1Q925H1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trps1Q925H1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trps1Q925H1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trps1Q925H1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trps1Q925H1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Trps1Q925H1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trps1Q925H1 Gm45102-201ENSMUST00000207427 857 ntBASIC21.23■□□□□ 0.99
Trps1Q925H1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trps1Q925H1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trps1Q925H1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trps1Q925H1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trps1Q925H1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trps1Q925H1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trps1Q925H1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trps1Q925H1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trps1Q925H1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trps1Q925H1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trps1Q925H1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trps1Q925H1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trps1Q925H1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trps1Q925H1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.21■□□□□ 0.99
Trps1Q925H1 Rps24-207ENSMUST00000224568 714 ntBASIC21.21■□□□□ 0.99
Trps1Q925H1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trps1Q925H1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trps1Q925H1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trps1Q925H1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trps1Q925H1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trps1Q925H1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trps1Q925H1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trps1Q925H1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trps1Q925H1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
Trps1Q925H1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Gm14117-201ENSMUST00000122417 843 ntBASIC21.2■□□□□ 0.98
Trps1Q925H1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trps1Q925H1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trps1Q925H1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trps1Q925H1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trps1Q925H1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trps1Q925H1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trps1Q925H1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.19■□□□□ 0.98
Trps1Q925H1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.19■□□□□ 0.98
Trps1Q925H1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trps1Q925H1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trps1Q925H1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trps1Q925H1 Gm22238-201ENSMUST00000175222 88 ntBASIC21.18■□□□□ 0.98
Trps1Q925H1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.18■□□□□ 0.98
Trps1Q925H1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Trps1Q925H1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Trps1Q925H1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.18■□□□□ 0.98
Trps1Q925H1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trps1Q925H1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.17■□□□□ 0.98
Trps1Q925H1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trps1Q925H1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
Trps1Q925H1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.17■□□□□ 0.98
Trps1Q925H1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trps1Q925H1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.17■□□□□ 0.98
Trps1Q925H1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trps1Q925H1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trps1Q925H1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trps1Q925H1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trps1Q925H1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trps1Q925H1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trps1Q925H1 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.16■□□□□ 0.98
Trps1Q925H1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trps1Q925H1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trps1Q925H1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trps1Q925H1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trps1Q925H1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.16■□□□□ 0.98
Trps1Q925H1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.16■□□□□ 0.98
Trps1Q925H1 Gm9870-201ENSMUST00000063874 645 ntBASIC21.16■□□□□ 0.98
Trps1Q925H1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trps1Q925H1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trps1Q925H1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trps1Q925H1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trps1Q925H1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.15■□□□□ 0.98
Trps1Q925H1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trps1Q925H1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trps1Q925H1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trps1Q925H1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms