Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb20Q91XZ9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb20Q91XZ9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb20Q91XZ9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 AC154532.1-201ENSMUST00000227860 965 ntBASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb20Q91XZ9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb20Q91XZ9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb20Q91XZ9 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb20Q91XZ9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb20Q91XZ9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.57■□□□□ 0.72
Pcdhb20Q91XZ9 AC073947.1-201ENSMUST00000216991 649 ntBASIC19.57■□□□□ 0.72
Pcdhb20Q91XZ9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdhb20Q91XZ9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb20Q91XZ9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb20Q91XZ9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb20Q91XZ9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhb20Q91XZ9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb20Q91XZ9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb20Q91XZ9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb20Q91XZ9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb20Q91XZ9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb20Q91XZ9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb20Q91XZ9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.52■□□□□ 0.72
Pcdhb20Q91XZ9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb20Q91XZ9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb20Q91XZ9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhb20Q91XZ9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb20Q91XZ9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms