Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhb6Q91XZ4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhb6Q91XZ4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb6Q91XZ4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Pcdhb6Q91XZ4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb6Q91XZ4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb6Q91XZ4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb6Q91XZ4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb6Q91XZ4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdhb6Q91XZ4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdhb6Q91XZ4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb6Q91XZ4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhb6Q91XZ4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.06■□□□□ 0.96
Pcdhb6Q91XZ4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb6Q91XZ4 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.05■□□□□ 0.96
Pcdhb6Q91XZ4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb6Q91XZ4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Pcdhb6Q91XZ4 Gm7417-201ENSMUST00000192950 473 ntBASIC21.05■□□□□ 0.96
Pcdhb6Q91XZ4 Gm9959-201ENSMUST00000068277 390 ntBASIC21.05■□□□□ 0.96
Pcdhb6Q91XZ4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb6Q91XZ4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb6Q91XZ4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb6Q91XZ4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb6Q91XZ4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb6Q91XZ4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb6Q91XZ4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhb6Q91XZ4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb6Q91XZ4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb6Q91XZ4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb6Q91XZ4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb6Q91XZ4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb6Q91XZ4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb6Q91XZ4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb6Q91XZ4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.02■□□□□ 0.96
Pcdhb6Q91XZ4 Etf1-202ENSMUST00000180351 108 ntBASIC21.02■□□□□ 0.96
Pcdhb6Q91XZ4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb6Q91XZ4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb6Q91XZ4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb6Q91XZ4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb6Q91XZ4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Pcdhb6Q91XZ4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb6Q91XZ4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb6Q91XZ4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb6Q91XZ4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb6Q91XZ4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb6Q91XZ4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb6Q91XZ4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhb6Q91XZ4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb6Q91XZ4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb6Q91XZ4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhb6Q91XZ4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhb6Q91XZ4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb6Q91XZ4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb6Q91XZ4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb6Q91XZ4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb6Q91XZ4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb6Q91XZ4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb6Q91XZ4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb6Q91XZ4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhb6Q91XZ4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb6Q91XZ4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb6Q91XZ4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb6Q91XZ4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdhb6Q91XZ4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb6Q91XZ4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb6Q91XZ4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb6Q91XZ4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb6Q91XZ4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb6Q91XZ4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms