Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb4Q91XX6 Gm10399-202ENSMUST00000202768 748 ntBASIC21.64■■□□□ 1.05
Pcdhgb4Q91XX6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdhgb4Q91XX6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdhgb4Q91XX6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb4Q91XX6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb4Q91XX6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb4Q91XX6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhgb4Q91XX6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb4Q91XX6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Pcdhgb4Q91XX6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb4Q91XX6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb4Q91XX6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb4Q91XX6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb4Q91XX6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb4Q91XX6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb4Q91XX6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb4Q91XX6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb4Q91XX6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb4Q91XX6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb4Q91XX6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb4Q91XX6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb4Q91XX6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb4Q91XX6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb4Q91XX6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb4Q91XX6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb4Q91XX6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb4Q91XX6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb4Q91XX6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhgb4Q91XX6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb4Q91XX6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhgb4Q91XX6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhgb4Q91XX6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb4Q91XX6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhgb4Q91XX6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.58■■□□□ 1.05
Pcdhgb4Q91XX6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.58■■□□□ 1.05
Pcdhgb4Q91XX6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgb4Q91XX6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgb4Q91XX6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb4Q91XX6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb4Q91XX6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb4Q91XX6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb4Q91XX6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb4Q91XX6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb4Q91XX6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb4Q91XX6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhgb4Q91XX6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb4Q91XX6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb4Q91XX6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb4Q91XX6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhgb4Q91XX6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb4Q91XX6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb4Q91XX6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb4Q91XX6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb4Q91XX6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb4Q91XX6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb4Q91XX6 Gm15820-201ENSMUST00000201566 728 ntBASIC21.54■■□□□ 1.04
Pcdhgb4Q91XX6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb4Q91XX6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhgb4Q91XX6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb4Q91XX6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb4Q91XX6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.52■■□□□ 1.04
Pcdhgb4Q91XX6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgb4Q91XX6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.52■■□□□ 1.04
Pcdhgb4Q91XX6 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.52■■□□□ 1.04
Pcdhgb4Q91XX6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb4Q91XX6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms