Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trex1Q91XB0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trex1Q91XB0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trex1Q91XB0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trex1Q91XB0 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.65■■□□□ 1.38
Trex1Q91XB0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Trex1Q91XB0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.64■■□□□ 1.38
Trex1Q91XB0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.64■■□□□ 1.38
Trex1Q91XB0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Trex1Q91XB0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trex1Q91XB0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trex1Q91XB0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trex1Q91XB0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
Trex1Q91XB0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trex1Q91XB0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trex1Q91XB0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trex1Q91XB0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trex1Q91XB0 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.63■■□□□ 1.37
Trex1Q91XB0 Spcs1-204ENSMUST00000226782 949 ntBASIC23.63■■□□□ 1.37
Trex1Q91XB0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trex1Q91XB0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.63■■□□□ 1.37
Trex1Q91XB0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Trex1Q91XB0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trex1Q91XB0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trex1Q91XB0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trex1Q91XB0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trex1Q91XB0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trex1Q91XB0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trex1Q91XB0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trex1Q91XB0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Trex1Q91XB0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trex1Q91XB0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trex1Q91XB0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trex1Q91XB0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trex1Q91XB0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.61■■□□□ 1.37
Trex1Q91XB0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Trex1Q91XB0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trex1Q91XB0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trex1Q91XB0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trex1Q91XB0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trex1Q91XB0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.6■■□□□ 1.37
Trex1Q91XB0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.6■■□□□ 1.37
Trex1Q91XB0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trex1Q91XB0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trex1Q91XB0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.6■■□□□ 1.37
Trex1Q91XB0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trex1Q91XB0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trex1Q91XB0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trex1Q91XB0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Trex1Q91XB0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trex1Q91XB0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trex1Q91XB0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trex1Q91XB0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trex1Q91XB0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trex1Q91XB0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trex1Q91XB0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Trex1Q91XB0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.58■■□□□ 1.37
Trex1Q91XB0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Trex1Q91XB0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trex1Q91XB0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Trex1Q91XB0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
Trex1Q91XB0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trex1Q91XB0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trex1Q91XB0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.57■■□□□ 1.36
Trex1Q91XB0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trex1Q91XB0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trex1Q91XB0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.56■■□□□ 1.36
Trex1Q91XB0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trex1Q91XB0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.56■■□□□ 1.36
Trex1Q91XB0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.56■■□□□ 1.36
Trex1Q91XB0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trex1Q91XB0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Trex1Q91XB0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trex1Q91XB0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.55■■□□□ 1.36
Trex1Q91XB0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.55■■□□□ 1.36
Trex1Q91XB0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.55■■□□□ 1.36
Trex1Q91XB0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trex1Q91XB0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Trex1Q91XB0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trex1Q91XB0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trex1Q91XB0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trex1Q91XB0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trex1Q91XB0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trex1Q91XB0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trex1Q91XB0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.54■■□□□ 1.36
Trex1Q91XB0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trex1Q91XB0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trex1Q91XB0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trex1Q91XB0 Gm26833-201ENSMUST00000180899 440 ntBASIC23.53■■□□□ 1.36
Trex1Q91XB0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.53■■□□□ 1.36
Trex1Q91XB0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trex1Q91XB0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trex1Q91XB0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trex1Q91XB0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Trex1Q91XB0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trex1Q91XB0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trex1Q91XB0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trex1Q91XB0 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.51■■□□□ 1.35
Trex1Q91XB0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Trex1Q91XB0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms