Protein–RNA interactions for Protein: Q8VEM1

Rnf130, E3 ubiquitin-protein ligase RNF130, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf130Q8VEM1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf130Q8VEM1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf130Q8VEM1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf130Q8VEM1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf130Q8VEM1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf130Q8VEM1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rnf130Q8VEM1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Gm5921-201ENSMUST00000075898 882 ntBASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Rnf130Q8VEM1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rnf130Q8VEM1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf130Q8VEM1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Gm43566-201ENSMUST00000196851 808 ntBASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf130Q8VEM1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf130Q8VEM1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf130Q8VEM1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf130Q8VEM1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf130Q8VEM1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf130Q8VEM1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rnf130Q8VEM1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf130Q8VEM1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf130Q8VEM1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf130Q8VEM1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf130Q8VEM1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf130Q8VEM1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf130Q8VEM1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf130Q8VEM1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.17■□□□□ 0.66
Rnf130Q8VEM1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf130Q8VEM1 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.17■□□□□ 0.66
Rnf130Q8VEM1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf130Q8VEM1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf130Q8VEM1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf130Q8VEM1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms