Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Upb1Q8VC97 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Upb1Q8VC97 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Upb1Q8VC97 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Upb1Q8VC97 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Upb1Q8VC97 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Upb1Q8VC97 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.27■■□□□ 1.16
Upb1Q8VC97 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Upb1Q8VC97 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Upb1Q8VC97 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.26■■□□□ 1.15
Upb1Q8VC97 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Upb1Q8VC97 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Upb1Q8VC97 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Upb1Q8VC97 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Upb1Q8VC97 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Upb1Q8VC97 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Upb1Q8VC97 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Upb1Q8VC97 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Upb1Q8VC97 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Upb1Q8VC97 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Upb1Q8VC97 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Upb1Q8VC97 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Upb1Q8VC97 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Upb1Q8VC97 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Upb1Q8VC97 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Upb1Q8VC97 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Upb1Q8VC97 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Upb1Q8VC97 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.24■■□□□ 1.15
Upb1Q8VC97 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Upb1Q8VC97 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Upb1Q8VC97 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Upb1Q8VC97 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Upb1Q8VC97 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Upb1Q8VC97 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Upb1Q8VC97 Gm43137-201ENSMUST00000198052 594 ntBASIC22.23■■□□□ 1.15
Upb1Q8VC97 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Upb1Q8VC97 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Upb1Q8VC97 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Upb1Q8VC97 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Upb1Q8VC97 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Upb1Q8VC97 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Upb1Q8VC97 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Upb1Q8VC97 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
Upb1Q8VC97 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Upb1Q8VC97 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Upb1Q8VC97 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Upb1Q8VC97 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Upb1Q8VC97 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Upb1Q8VC97 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Upb1Q8VC97 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Upb1Q8VC97 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Upb1Q8VC97 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.21■■□□□ 1.15
Upb1Q8VC97 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Upb1Q8VC97 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.21■■□□□ 1.15
Upb1Q8VC97 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Upb1Q8VC97 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Upb1Q8VC97 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Upb1Q8VC97 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Upb1Q8VC97 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.2■■□□□ 1.14
Upb1Q8VC97 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Upb1Q8VC97 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Upb1Q8VC97 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.19■■□□□ 1.14
Upb1Q8VC97 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.19■■□□□ 1.14
Upb1Q8VC97 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Upb1Q8VC97 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Upb1Q8VC97 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Upb1Q8VC97 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Upb1Q8VC97 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Upb1Q8VC97 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Upb1Q8VC97 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Upb1Q8VC97 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.18■■□□□ 1.14
Upb1Q8VC97 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Upb1Q8VC97 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Upb1Q8VC97 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Upb1Q8VC97 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Upb1Q8VC97 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.17■■□□□ 1.14
Upb1Q8VC97 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.17■■□□□ 1.14
Upb1Q8VC97 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Upb1Q8VC97 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Upb1Q8VC97 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.16■■□□□ 1.14
Upb1Q8VC97 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.16■■□□□ 1.14
Upb1Q8VC97 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.16■■□□□ 1.14
Upb1Q8VC97 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Upb1Q8VC97 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Upb1Q8VC97 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.15■■□□□ 1.14
Upb1Q8VC97 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Upb1Q8VC97 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Upb1Q8VC97 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Upb1Q8VC97 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.15■■□□□ 1.14
Upb1Q8VC97 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Upb1Q8VC97 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Upb1Q8VC97 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Upb1Q8VC97 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Upb1Q8VC97 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.14■■□□□ 1.14
Upb1Q8VC97 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Upb1Q8VC97 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Upb1Q8VC97 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.14■■□□□ 1.13
Upb1Q8VC97 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Upb1Q8VC97 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Upb1Q8VC97 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms