Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.36■■□□□ 1.01
Foxe1Q8R2I0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxe1Q8R2I0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.35■■□□□ 1.01
Foxe1Q8R2I0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxe1Q8R2I0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.34■■□□□ 1.01
Foxe1Q8R2I0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxe1Q8R2I0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxe1Q8R2I0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxe1Q8R2I0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.34■■□□□ 1.01
Foxe1Q8R2I0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Foxe1Q8R2I0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Foxe1Q8R2I0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Foxe1Q8R2I0 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.33■■□□□ 1.01
Foxe1Q8R2I0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxe1Q8R2I0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxe1Q8R2I0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Foxe1Q8R2I0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.33■■□□□ 1.01
Foxe1Q8R2I0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.32■■□□□ 1
Foxe1Q8R2I0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxe1Q8R2I0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Foxe1Q8R2I0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.31■■□□□ 1
Foxe1Q8R2I0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Foxe1Q8R2I0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Foxe1Q8R2I0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.31■■□□□ 1
Foxe1Q8R2I0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.31■■□□□ 1
Foxe1Q8R2I0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Foxe1Q8R2I0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.3■■□□□ 1
Foxe1Q8R2I0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Foxe1Q8R2I0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Foxe1Q8R2I0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Foxe1Q8R2I0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.3■■□□□ 1
Foxe1Q8R2I0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Foxe1Q8R2I0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Foxe1Q8R2I0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.29■■□□□ 1
Foxe1Q8R2I0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.29■■□□□ 1
Foxe1Q8R2I0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.29■■□□□ 1
Foxe1Q8R2I0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Foxe1Q8R2I0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Foxe1Q8R2I0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.28■■□□□ 1
Foxe1Q8R2I0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.28■■□□□ 1
Foxe1Q8R2I0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.28■■□□□ 1
Foxe1Q8R2I0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
Foxe1Q8R2I0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.28■■□□□ 1
Foxe1Q8R2I0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.28■■□□□ 1
Foxe1Q8R2I0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Foxe1Q8R2I0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Foxe1Q8R2I0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Foxe1Q8R2I0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.26■□□□□ 0.99
Foxe1Q8R2I0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Foxe1Q8R2I0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.26■□□□□ 0.99
Foxe1Q8R2I0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxe1Q8R2I0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Foxe1Q8R2I0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.26■□□□□ 0.99
Foxe1Q8R2I0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.25■□□□□ 0.99
Foxe1Q8R2I0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxe1Q8R2I0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Foxe1Q8R2I0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxe1Q8R2I0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.25■□□□□ 0.99
Foxe1Q8R2I0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Gm12441-201ENSMUST00000121806 588 ntBASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Gm11421-201ENSMUST00000122124 294 ntBASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.24■□□□□ 0.99
Foxe1Q8R2I0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxe1Q8R2I0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxe1Q8R2I0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Foxe1Q8R2I0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.23■□□□□ 0.99
Foxe1Q8R2I0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxe1Q8R2I0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Foxe1Q8R2I0 Gm22325-201ENSMUST00000158904 308 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms