Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.14■□□□□ 0.81
Treml1Q8K558 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Treml1Q8K558 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Treml1Q8K558 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Treml1Q8K558 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Treml1Q8K558 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Treml1Q8K558 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Treml1Q8K558 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Treml1Q8K558 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.13■□□□□ 0.81
Treml1Q8K558 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Treml1Q8K558 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Treml1Q8K558 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Treml1Q8K558 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.13■□□□□ 0.81
Treml1Q8K558 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.12■□□□□ 0.81
Treml1Q8K558 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Treml1Q8K558 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.12■□□□□ 0.81
Treml1Q8K558 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Treml1Q8K558 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Treml1Q8K558 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Treml1Q8K558 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Treml1Q8K558 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.11■□□□□ 0.81
Treml1Q8K558 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.11■□□□□ 0.81
Treml1Q8K558 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Treml1Q8K558 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Treml1Q8K558 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Treml1Q8K558 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Treml1Q8K558 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Treml1Q8K558 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Treml1Q8K558 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Treml1Q8K558 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Treml1Q8K558 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Treml1Q8K558 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Treml1Q8K558 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Treml1Q8K558 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Treml1Q8K558 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Treml1Q8K558 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Treml1Q8K558 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.09■□□□□ 0.81
Treml1Q8K558 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Treml1Q8K558 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Treml1Q8K558 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Treml1Q8K558 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
Treml1Q8K558 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Treml1Q8K558 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.08■□□□□ 0.81
Treml1Q8K558 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Treml1Q8K558 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Treml1Q8K558 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.08■□□□□ 0.8
Treml1Q8K558 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Treml1Q8K558 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Treml1Q8K558 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Treml1Q8K558 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Treml1Q8K558 Gm9870-201ENSMUST00000063874 645 ntBASIC20.07■□□□□ 0.8
Treml1Q8K558 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Treml1Q8K558 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Treml1Q8K558 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Treml1Q8K558 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Treml1Q8K558 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Treml1Q8K558 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Treml1Q8K558 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Treml1Q8K558 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml1Q8K558 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.06■□□□□ 0.8
Treml1Q8K558 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Treml1Q8K558 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Treml1Q8K558 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml1Q8K558 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Treml1Q8K558 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml1Q8K558 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml1Q8K558 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Treml1Q8K558 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Treml1Q8K558 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.05■□□□□ 0.8
Treml1Q8K558 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.05■□□□□ 0.8
Treml1Q8K558 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Treml1Q8K558 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Treml1Q8K558 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Treml1Q8K558 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml1Q8K558 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml1Q8K558 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Treml1Q8K558 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Treml1Q8K558 Gm7143-201ENSMUST00000222811 859 ntBASIC20.04■□□□□ 0.8
Treml1Q8K558 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml1Q8K558 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml1Q8K558 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml1Q8K558 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Treml1Q8K558 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Treml1Q8K558 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Treml1Q8K558 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Treml1Q8K558 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Treml1Q8K558 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Treml1Q8K558 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.03■□□□□ 0.8
Treml1Q8K558 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Treml1Q8K558 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Treml1Q8K558 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Treml1Q8K558 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Treml1Q8K558 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Treml1Q8K558 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Treml1Q8K558 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Treml1Q8K558 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Treml1Q8K558 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Treml1Q8K558 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Treml1Q8K558 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Treml1Q8K558 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms