Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Gm9870-201ENSMUST00000063874 645 ntBASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 Gm38160-201ENSMUST00000193090 2499 ntBASIC25.03■■□□□ 1.6
Sf3a1Q8K4Z5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sf3a1Q8K4Z5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sf3a1Q8K4Z5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sf3a1Q8K4Z5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sf3a1Q8K4Z5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sf3a1Q8K4Z5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sf3a1Q8K4Z5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC25.02■■□□□ 1.6
Sf3a1Q8K4Z5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Sf3a1Q8K4Z5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC25.01■■□□□ 1.59
Sf3a1Q8K4Z5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Sf3a1Q8K4Z5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sf3a1Q8K4Z5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC25.01■■□□□ 1.59
Sf3a1Q8K4Z5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Sf3a1Q8K4Z5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sf3a1Q8K4Z5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
Sf3a1Q8K4Z5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sf3a1Q8K4Z5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Sf3a1Q8K4Z5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sf3a1Q8K4Z5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Sf3a1Q8K4Z5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sf3a1Q8K4Z5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.98■■□□□ 1.59
Sf3a1Q8K4Z5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sf3a1Q8K4Z5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.98■■□□□ 1.59
Sf3a1Q8K4Z5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Sf3a1Q8K4Z5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Sf3a1Q8K4Z5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Sf3a1Q8K4Z5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sf3a1Q8K4Z5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Sf3a1Q8K4Z5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sf3a1Q8K4Z5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Sf3a1Q8K4Z5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Sf3a1Q8K4Z5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Sf3a1Q8K4Z5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Sf3a1Q8K4Z5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sf3a1Q8K4Z5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.94■■□□□ 1.58
Sf3a1Q8K4Z5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.94■■□□□ 1.58
Sf3a1Q8K4Z5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Sf3a1Q8K4Z5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sf3a1Q8K4Z5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sf3a1Q8K4Z5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Sf3a1Q8K4Z5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Sf3a1Q8K4Z5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sf3a1Q8K4Z5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Sf3a1Q8K4Z5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.93■■□□□ 1.58
Sf3a1Q8K4Z5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sf3a1Q8K4Z5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sf3a1Q8K4Z5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Sf3a1Q8K4Z5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sf3a1Q8K4Z5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sf3a1Q8K4Z5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sf3a1Q8K4Z5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sf3a1Q8K4Z5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Sf3a1Q8K4Z5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sf3a1Q8K4Z5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Sf3a1Q8K4Z5 Gm12922-201ENSMUST00000120626 809 ntBASIC24.91■■□□□ 1.58
Sf3a1Q8K4Z5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Sf3a1Q8K4Z5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Sf3a1Q8K4Z5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Sf3a1Q8K4Z5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.9■■□□□ 1.58
Sf3a1Q8K4Z5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sf3a1Q8K4Z5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sf3a1Q8K4Z5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sf3a1Q8K4Z5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sf3a1Q8K4Z5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sf3a1Q8K4Z5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Sf3a1Q8K4Z5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.89■■□□□ 1.58
Sf3a1Q8K4Z5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.89■■□□□ 1.58
Sf3a1Q8K4Z5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Sf3a1Q8K4Z5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.89■■□□□ 1.58
Sf3a1Q8K4Z5 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.89■■□□□ 1.58
Sf3a1Q8K4Z5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Sf3a1Q8K4Z5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Sf3a1Q8K4Z5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Sf3a1Q8K4Z5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sf3a1Q8K4Z5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms