Protein–RNA interactions for Protein: Q8K3M1

Rdh16f2, Cis-retinol/3alpha hydroxysterol short-chain dehydrogenase-like protein, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f2Q8K3M1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rdh16f2Q8K3M1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh16f2Q8K3M1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Rdh16f2Q8K3M1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh16f2Q8K3M1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh16f2Q8K3M1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh16f2Q8K3M1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh16f2Q8K3M1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh16f2Q8K3M1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh16f2Q8K3M1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh16f2Q8K3M1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh16f2Q8K3M1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh16f2Q8K3M1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
Rdh16f2Q8K3M1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
Rdh16f2Q8K3M1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh16f2Q8K3M1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh16f2Q8K3M1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh16f2Q8K3M1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Gm26833-201ENSMUST00000180899 440 ntBASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Spcs1-204ENSMUST00000226782 949 ntBASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.22■□□□□ 0.67
Rdh16f2Q8K3M1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh16f2Q8K3M1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Rdh16f2Q8K3M1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh16f2Q8K3M1 Gm12251-201ENSMUST00000117893 792 ntBASIC19.21■□□□□ 0.67
Rdh16f2Q8K3M1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh16f2Q8K3M1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.21■□□□□ 0.67
Rdh16f2Q8K3M1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh16f2Q8K3M1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rdh16f2Q8K3M1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.2■□□□□ 0.66
Rdh16f2Q8K3M1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.19■□□□□ 0.66
Rdh16f2Q8K3M1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.18■□□□□ 0.66
Rdh16f2Q8K3M1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rdh16f2Q8K3M1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Rdh16f2Q8K3M1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh16f2Q8K3M1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh16f2Q8K3M1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh16f2Q8K3M1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Rdh16f2Q8K3M1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh16f2Q8K3M1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Gm43060-201ENSMUST00000200621 289 ntBASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh16f2Q8K3M1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh16f2Q8K3M1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh16f2Q8K3M1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh16f2Q8K3M1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rdh16f2Q8K3M1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rdh16f2Q8K3M1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh16f2Q8K3M1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.16■□□□□ 0.66
Rdh16f2Q8K3M1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rdh16f2Q8K3M1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rdh16f2Q8K3M1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rdh16f2Q8K3M1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rdh16f2Q8K3M1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rdh16f2Q8K3M1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh16f2Q8K3M1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh16f2Q8K3M1 Gm10493-201ENSMUST00000097270 612 ntBASIC19.14■□□□□ 0.65
Rdh16f2Q8K3M1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh16f2Q8K3M1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh16f2Q8K3M1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh16f2Q8K3M1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh16f2Q8K3M1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rdh16f2Q8K3M1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rdh16f2Q8K3M1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms